generate ComplexHeatmap color scale

The code for creating a function that maps values to colors for ComplexHeatmap heatmaps is not easy for me to remember. Here it is.

Usage

ft_complexheatmap_scale()

Value

string

Details

My favorite colors to use include:

• viridis::viridis

• scico::scico(n, palette = "vik")

You can also use scico::scico_palette_show() to see other colorblind safe palettes.

See also

Other Code Generators: ft_add_padding(), ft_data_dictionary(), ft_ggplot2_add_ellipse(), ft_ggplot2_colors(), ft_ggplot2_legend_inside(), ft_ggplot2_rotate_axis_labels(), ft_ggplot2_self_colors(), ft_knitr_opts(), ft_plot_includes(), ft_remove_figures(), ft_rename_code(), ft_title_block(), ft_upset_add_counts(), ft_upset_comb_matrix()

Other Colors: ft_discretize_colorscale(), ft_ggplot2_colors()

Examples

ft_complexheatmap_scale()
#> n_value = 20
#> circlize::colorRamp2(seq(low, high, length.out = n_value), viridis::viridis(n_value))
#> 
#> or
#> 
#> circlize::colorRamp2(seq(low, high, length.out = n_value), scico::scico(n_value, palette = "vik"))